CDS: Y42G9A.4d
Y42G9A.4d | SMap | S_parent | Sequence | Y42G9A | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 25 | ||
4393 | 4553 | ||||
5055 | 5359 | ||||
6090 | 6228 | ||||
6672 | 6798 | ||||
8219 | 8267 | ||||
8317 | 8530 | ||||
9043 | 9102 | ||||
9336 | 9470 | ||||
10494 | 10647 | ||||
11120 | 11295 | ||||
DB_info | Database | TREMBL | Q65XY0_CAEEL | ||
TrEMBL_AC | Q65XY0 | ||||
NDB | GI_number | 52839819 | |||
Protein_id | Y42G9A | AAU87813 | 1 | ||
DB_remark | contains similarity to Pfam domain PF00288 (GHMP kinases putative ATP-binding protein)contains similarity to Interpro domains IPR006206 (Mevalonate and galactokinase), IPR006204 (GHMP kinase), IPR006205 (Mevalonate kinase) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Paper_evidence | PMID15312767 | |||
Visible | Gene | Y42G9A.4 | |||
Corresponding_transcript | Y42G9A.4d | ||||
Corresponding_protein | WP:CE37569 | ||||
Corresponding_PCR_product | cenix:332-e11 | ||||
mv_Y42G9A.4 | |||||
sjj_Y42G9A.c | |||||
Corresponding_RNAi_reagent | Cenix:332-e11 | ||||
sjj_Y42G9A.c | |||||
Matching_cDNA | yk1180d02.5 | Inferred_automatically | transcript_builder.pl | ||
yk90b5.5 | Inferred_automatically | transcript_builder.pl | |||
yk1202b10.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:332-e11 | ||||
JA:Y42G9A.c | |||||
Simmer:Y42G9A.c | |||||
WB_RNAi_result | JA:Y42G9A.c | ||||
Simmer:Y42G9A.c | |||||
MV_SV:mv_Y42G9A.4 | |||||
Cenix:332-e11 | |||||
GO_term (13) | |||||
Microarray_results | SMD_Y42G9A.C | ||||
Remark | made this isoform based on paper evidence("A New Definition of the Consensus Sequence of the Peroxisome Targeting Signal Type 2.")[20040910 po] | Paper_evidence | PMID15312767 | ||
Associated_feature | WBsf004508 | ||||
Method | curated |