Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: Y42G9A.4d   

Y42G9A.4dSMapS_parentSequenceY42G9A
Structure Source_exons 125
43934553
50555359
60906228
66726798
82198267
83178530
90439102
93369470
1049410647
1112011295
DB_info Database TREMBL Q65XY0_CAEEL
TrEMBL_AC Q65XY0
NDB GI_number 52839819
Protein_idY42G9A AAU878131
DB_remarkcontains similarity to Pfam domain PF00288 (GHMP kinases putative ATP-binding protein)contains similarity to Interpro domains IPR006206 (Mevalonate and galactokinase), IPR006204 (GHMP kinase), IPR006205 (Mevalonate kinase)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
IsoformPaper_evidencePMID15312767
Visible GeneY42G9A.4
Corresponding_transcriptY42G9A.4d
Corresponding_proteinWP:CE37569
Corresponding_PCR_product cenix:332-e11
mv_Y42G9A.4
sjj_Y42G9A.c
Corresponding_RNAi_reagent Cenix:332-e11
sjj_Y42G9A.c
Matching_cDNA yk1180d02.5 Inferred_automaticallytranscript_builder.pl
yk90b5.5 Inferred_automaticallytranscript_builder.pl
yk1202b10.5 Inferred_automaticallytranscript_builder.pl
RNAi_result Cenix:332-e11
JA:Y42G9A.c
Simmer:Y42G9A.c
WB_RNAi_result JA:Y42G9A.c
Simmer:Y42G9A.c
MV_SV:mv_Y42G9A.4
Cenix:332-e11
GO_term (13)
Microarray_resultsSMD_Y42G9A.C
Remarkmade this isoform based on paper evidence("A New Definition of the Consensus Sequence of the Peroxisome Targeting Signal Type 2.")[20040910 po]Paper_evidencePMID15312767
Associated_featureWBsf004508
Methodcurated