CDS: Y47G6A.8
Y47G6A.8 | SMap | S_parent | Sequence | Y47G6A | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 90 | ||
435 | 1142 | ||||
1934 | 2085 | ||||
2138 | 2336 | ||||
DB_info | Database | TREMBL (2) | |||
NDB | GI_number | 7331965 | |||
NCBI | RefSeq | NM_058767 | |||
Protein_id | Y47G6A | AAF60653 | 1 | ||
DB_remark | C. elegans CRN-1 protein; contains similarity to Pfam domains PF00752 (XPG N-terminal domain), PF00867 (XPG I-region), PF01367 (5'-3' exonuclease, C-terminal SAM fold)contains similarity to Interpro domains IPR006084 (DNA repair protein (XPGC)/yeast Rad), IPR006086 (XPG I), IPR006085 (XPG N-terminal), IPR000513 (5'3'-Exonuclease N- and I-domain), IPR008918 (Helix-hairpin-helix motif, class 2) | ||||
Origin (2) | |||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | Y47G6A.8 | |||
Corresponding_transcript | Y47G6A.8 | ||||
Corresponding_protein | WP:CE22109 | ||||
Corresponding_PCR_product | cenix:72-e11 | ||||
mv_Y47G6A.8 | |||||
sjj_Y47G6A_247.i | |||||
Corresponding_RNAi_reagent | Cenix:72-e11 | ||||
sjj_Y47G6A_247.i | |||||
Matching_cDNA | yk137e10.3 | Inferred_automatically | transcript_builder.pl | ||
OSTF003A3_1 | Inferred_automatically | transcript_builder.pl | |||
yk136e1.5 | Inferred_automatically | transcript_builder.pl | |||
yk136d2.3 | Inferred_automatically | transcript_builder.pl | |||
yk136d2.5 | Inferred_automatically | transcript_builder.pl | |||
yk109e5.3 | Inferred_automatically | transcript_builder.pl | |||
AY303575 | Inferred_automatically | transcript_builder.pl | |||
OSTR012B6_1 | Inferred_automatically | transcript_builder.pl | |||
yk137e10.5 | Inferred_automatically | transcript_builder.pl | |||
yk614a3.5 | Inferred_automatically | transcript_builder.pl | |||
yk330c11.3 | Inferred_automatically | transcript_builder.pl | |||
yk96a8.5 | Inferred_automatically | transcript_builder.pl | |||
yk136e1.3 | Inferred_automatically | transcript_builder.pl | |||
yk1515g09.3 | Inferred_automatically | transcript_builder.pl | |||
yk650b7.5 | Inferred_automatically | transcript_builder.pl | |||
yk614a3.3 | Inferred_automatically | transcript_builder.pl | |||
yk289g6.5 | Inferred_automatically | transcript_builder.pl | |||
yk650b7.3 | Inferred_automatically | transcript_builder.pl | |||
CK575470 | Inferred_automatically | transcript_builder.pl | |||
CK584671 | Inferred_automatically | transcript_builder.pl | |||
yk245a5.5 | Inferred_automatically | transcript_builder.pl | |||
yk330c11.5 | Inferred_automatically | transcript_builder.pl | |||
yk607b11.5 | Inferred_automatically | transcript_builder.pl | |||
OSTF031B2_1 | Inferred_automatically | transcript_builder.pl | |||
OSTR031B2_1 | Inferred_automatically | transcript_builder.pl | |||
OSTR003A3_1 | Inferred_automatically | transcript_builder.pl | |||
yk156h1.5 | Inferred_automatically | transcript_builder.pl | |||
yk607b11.3 | Inferred_automatically | transcript_builder.pl | |||
yk109e5.5 | Inferred_automatically | transcript_builder.pl | |||
yk156h1.3 | Inferred_automatically | transcript_builder.pl | |||
yk289g6.3 | Inferred_automatically | transcript_builder.pl | |||
yk245a5.3 | Inferred_automatically | transcript_builder.pl | |||
OSTF012B6_1 | Inferred_automatically | transcript_builder.pl | |||
CK578389 | Inferred_automatically | transcript_builder.pl | |||
yk1515g09.5 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:72-e11 | ||||
JA:Y47G6A_247.i | |||||
Simmer:Y47G6A_247.i:Screen_A | |||||
Simmer:Y47G6A_247.i:Screen_B | |||||
WB_RNAi_result (6) | |||||
GO_term (11) | |||||
Microarray_results | SMD_Y47G6A_247.I | ||||
189020_at | |||||
Aff_Y47G6A_247.I | |||||
Brief_identification | endonuclease | ||||
Y2H_target | Y2H000470 | ||||
Y2H007709 | |||||
Associated_feature | WBsf014999 | ||||
Method | curated |