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CDS: Y48E1A.1a   

Y48E1A.1aSMapS_parentSequenceSUPERLINK_CB_II
Structure Source_exons (9)
DB_info Database TREMBL O17628_CAEEL
TrEMBL_AC O17628
NDB GI_number 5824819
Protein_id C31C9 CAB056992
Y48E1A CAB076872
Y54G9A CAB544601
DB_remarkcontains similarity to Pfam domains PF04998 (RNA polymerase Rpb1, domain 5), PF00623 (RNA polymerase Rpb1, domain 2), PF04997 (RNA polymerase Rpb1, domain 1), PF05000 (RNA polymerase Rpb1, domain 4), PF04983 (RNA polymerase Rpb1, domain 3)contains similarity to Interpro domains IPR006592 (RNA polymerase I subunit A, N-terminal), IPR007066 (RNA polymerase Rpb1, domain 3), IPR007080 (RNA polymerase Rpb1, domain 1), IPR007083 (RNA polymerase Rpb1, domain 4), IPR000722 (RNA polymerase, alpha subunit), IPR007081 (RNA polymerase Rpb1, domain 5)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
IsoformAccession_evidenceNDB AV203142
Visible GeneY48E1A.1
Corresponding_transcriptY48E1A.1a
Corresponding_proteinWP:CE22157
Corresponding_PCR_product cenix:54-d5
mv_Y48E1A.1.v5
Corresponding_RNAi_reagentCenix:54-d5
Matching_cDNA (8)
RNAi_resultCenix:54-d5
WB_RNAi_resultCenix:54-d5
GO_term GO:0003677 IEA Inferred_automatically
GO:0003899 IEA Inferred_automatically
GO:0006350 IEA Inferred_automatically
GO:0005634 IEA Inferred_automatically
Variation (5)
Microarray_results 193524_at
Aff_Y48E1A.1
Brief_identificationDNA-directed RNA polymerase I largest subunit
Y2H_targetY2H006856
Methodcurated