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CDS: Y50D7A.3a
| Y50D7A.3a | SMap | S_parent | Sequence | Y50D7A | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | Q9N3L4_CAEEL | ||
| TrEMBL_AC | Q9N3L4 | ||||
| NDB | GI_number | 26251575 | |||
| Protein_id | Y50D7A | AAF59648 | 4 | ||
| DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain)contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase), IPR002291 (Phosphorylase kinase, gamma catalytic subunit) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | Accession_evidence | EMBL | BJ126969 | ||
| Visible | Gene | Y50D7A.3 | |||
| Corresponding_transcript | Y50D7A.3a | ||||
| Corresponding_protein | WP:CE32982 | ||||
| Corresponding_PCR_product | cenix:91-e1 | ||||
| cenix:189-d12 | |||||
| mv_Y50D7A.g | |||||
| Corresponding_RNAi_reagent | Cenix:91-e1 | ||||
| Cenix:189-d12 | |||||
| Matching_cDNA | OSTF049B1_1 | Inferred_automatically | transcript_builder.pl | ||
| OSTR049B1_1 | Inferred_automatically | transcript_builder.pl | |||
| yk1341b02.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1133f10.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:189-d12 | ||||
| Cenix:91-e1 | |||||
| WB_RNAi_result | MV_SV:mv_Y50D7A.g | ||||
| Cenix:189-d12 | |||||
| Cenix:91-e1 | |||||
| GO_term (7) | |||||
| Microarray_results | 185363_at | ||||
| Aff_Y50D7_156.A | |||||
| Remark | removed one exon based on EST data 010821 db | ||||
| merged Y50D7A.10 with Y50D7A.3 based on yk1341b02.5 and yk1133f10.5. [tb 20021125] | |||||
| this isoform is based on EMBL accession BJ126969 | |||||
| Associated_feature | WBsf003389 | ||||
| Method | curated |
