CDS: Y54E10BL.2
Y54E10BL.2 | SMap | S_parent | Sequence | Y54E10BL | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 739 | ||
800 | 918 | ||||
DB_info | Database | TREMBL | Q9N3D7_CAEEL | ||
TrEMBL_AC | Q9N3D7 | ||||
NDB | GI_number | 7332088 | |||
NCBI | RefSeq | NM_058687 | |||
Protein_id | Y54E10BL | AAF60775 | 1 | ||
DB_remark | C. elegans COL-48 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | Y54E10BL.2 | |||
Corresponding_transcript | Y54E10BL.2 | ||||
Corresponding_protein | WP:CE25434 | ||||
Corresponding_PCR_product (7) | |||||
Corresponding_RNAi_reagent | sjj_Y54E10B_152.b | ||||
sjj_Y54E10B_152.d | |||||
TH:190-h5 | |||||
Matching_cDNA (6) | |||||
RNAi_result | TH:190-h5 | ||||
JA:Y54E10B_152.b | |||||
JA:Y54E10B_152.d | |||||
WB_RNAi_result | JA:Y54E10B_152.b | ||||
JA:Y54E10B_152.d | |||||
MV_SV:mv_Y54E10BL.2 | |||||
TH:190-h5 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results | SMD_Y54E10B_152.B | ||||
SMD_Y54E10B_152.D | |||||
Aff_Y54E10B_152.B | |||||
Brief_identification | collagen | ||||
Method | curated |