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CDS: Y54E10BL.2
| Y54E10BL.2 | SMap | S_parent | Sequence | Y54E10BL | |
|---|---|---|---|---|---|
| Structure | Source_exons (2) | ||||
| DB_info | Database | TREMBL | Q9N3D7_CAEEL | ||
| TrEMBL_AC | Q9N3D7 | ||||
| NDB | GI_number | 7332088 | |||
| NCBI | RefSeq | NM_058687 | |||
| Protein_id | Y54E10BL | AAF60775 | 1 | ||
| DB_remark | C. elegans COL-48 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | Y54E10BL.2 | |||
| Corresponding_transcript | Y54E10BL.2 | ||||
| Corresponding_protein | WP:CE25434 | ||||
| Corresponding_PCR_product (7) | |||||
| Corresponding_RNAi_reagent | sjj_Y54E10B_152.b | ||||
| sjj_Y54E10B_152.d | |||||
| TH:190-h5 | |||||
| Matching_cDNA (6) | |||||
| RNAi_result | TH:190-h5 | ||||
| JA:Y54E10B_152.b | |||||
| JA:Y54E10B_152.d | |||||
| WB_RNAi_result | JA:Y54E10B_152.b | ||||
| JA:Y54E10B_152.d | |||||
| MV_SV:mv_Y54E10BL.2 | |||||
| TH:190-h5 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_Y54E10B_152.B | ||||
| SMD_Y54E10B_152.D | |||||
| Aff_Y54E10B_152.B | |||||
| Brief_identification | collagen | ||||
| Method | curated |
