Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: Y55F3AM.3c   

Y55F3AM.3cSMapS_parentSequenceY55F3AM
Structure Source_exons 1519
15592248
36963794
DB_info Database TREMBL Q8MXS6_CAEEL
TrEMBL_AC Q8MXS6
NDB GI_number 22532839
Protein_idY55F3AM AAM979771
DB_remarkcontains similarity to Pfam domain PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain))contains similarity to Interpro domains IPR006509 (Splicing factor, CC1-like), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA-binding region RNP-1 (RNA recognition motif))
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Isoform Accession_evidenceEMBL CEK066AXF
Inferred_automaticallytranscript_builder
Visible GeneY55F3AM.3
Corresponding_transcript Y55F3AM.3c.1
Y55F3AM.3c.2
Corresponding_proteinWP:CE31656
Corresponding_PCR_product cenix:56-b11
cenix:144-h7
mv_Y55F3AM.3a
sjj_Y55F3A_746.f
Matching_cDNA yk66a10.5 Inferred_automaticallytranscript_builder.pl
yk252h11.5 Inferred_automaticallytranscript_builder.pl
RNAi_resultJA:Y55F3A_746.a
WB_RNAi_result (6)
GO_term (10)
Variationsnp_Y55F3AM[8]
Microarray_results SMD_Y55F3A_746.F
187389_s_at
Aff_Y55F3A_746.F
Remark[20020729 db] EST data indicates a confirmed intron in the 5' UTR
Methodcurated