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CDS: Y80D3A.4
| Y80D3A.4 | SMap | S_parent | Sequence | Y80D3A | |
|---|---|---|---|---|---|
| Structure | Source_exons (8) | ||||
| DB_info | Database | TREMBL | Q9U1R0_CAEEL | ||
| TrEMBL_AC | Q9U1R0 | ||||
| NDB | GI_number | 50470805 | |||
| Protein_id | Y80D3A | CAB60441 | 2 | ||
| DB_remark | C. elegans NHR-243 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains))contains similarity to Interpro domains IPR000536 (Nuclear hormone receptor, ligand-binding), IPR001628 (Nuclear hormone receptor, DNA-binding) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | Y80D3A.4 | |||
| Corresponding_transcript | Y80D3A.4 | ||||
| Corresponding_protein | WP:CE36624 | ||||
| Corresponding_PCR_product | cenix:171-f10 | ||||
| mv_Y80D3A.4 | |||||
| sjj_Y80D3A.k | |||||
| sjj_Y80D3B.a | |||||
| Corresponding_RNAi_reagent | Cenix:171-f10 | ||||
| Matching_cDNA | OSTF184E7_1 | Inferred_automatically | transcript_builder.pl | ||
| CK586482 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:171-f10 | ||||
| WB_RNAi_result | MV_SV:mv_Y80D3A.4 | ||||
| Cenix:171-f10 | |||||
| GO_term | GO:0003700 | IEA | Inferred_automatically | ||
| GO:0006355 | IEA | Inferred_automatically | |||
| GO:0005634 | IEA | Inferred_automatically | |||
| GO:0003707 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_Y80D3A.K | ||||
| SMD_Y80D3B.A | |||||
| 182290_at | |||||
| Y2H_target | Y2H001866 | ||||
| Remark | [040421 dl] Modified prediction based on transcript evidence. Removed exon 2 based on OSTF184E7_1 | ||||
| Method | curated |
