Gene: Y92C3B.2
Y92C3B.2 | SMap | S_parent | Sequence | Y92C3B | ||
---|---|---|---|---|---|---|
Chromosome | III | |||||
Identity (5) | ||||||
Gene_info | Gene_class | uaf | ||||
Allele | gk392 | Inferred_automatically | From strain object: VC720 | |||
Strain | VC720 | |||||
GO_term (8) | ||||||
Contained_in_operon | CEOP3052 | |||||
Structured_description | Provisional_description | uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor and is a homolog of mammalian and fly U2AF65; UAF-1 has been shown to bind RNA and this binding is enhanced by UAF-2; the abundance of one alternative transcript appears to be increased during starvation and this transcript is retained in the nucleus; uaf-1 affects embryonic viability, based on RNAi analysis. | Paper_evidence | WBPaper00002652 | ||
WBPaper00003463 | ||||||
WBPaper00003474 | ||||||
WBPaper00003836 | ||||||
Person_evidence | WBPerson48 | |||||
Curator_confirmed | WBPerson48 | |||||
Date_last_updated | 07 Jan 2005 00:00:00 | |||||
Concise_description | uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor and is a homolog of mammalian and fly U2AF65; UAF-1 has been shown to bind RNA and this binding is enhanced by UAF-2; the abundance of one alternative transcript appears to be increased during starvation and this transcript is retained in the nucleus; uaf-1 affects embryonic viability, based on RNAi analysis. | |||||
Sequence_features | uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor. | Paper_evidence | WBPaper00002652 | |||
Curator_confirmed | WBPerson48 | |||||
UAF-1 is a homolog of mammalian and fly U2AF65. | Paper_evidence | WBPaper00003474 | ||||
Curator_confirmed | WBPerson48 | |||||
Functional_pathway | uaf-1 affects embryonic viability, based on RNAi analysis. | Paper_evidence | WBPaper00003463 | |||
Curator_confirmed | WBPerson48 | |||||
Functional_physical_interaction | UAF-1 has been shown to bind DNA and this binding is enhanced by UAF-2. | Paper_evidence | WBPaper00003836 | |||
Curator_confirmed | WBPerson48 | |||||
Expression | The abundance of one alternative transcript for uaf-1 appears to be increased during starvation and this transcript is retained in the nucleus. | Paper_evidence | WBPaper00003474 | |||
Curator_confirmed | WBPerson48 | |||||
Molecular_info | Corresponding_CDS | Y92C3B.2a | ||||
Y92C3B.2b | ||||||
Y92C3B.2c | ||||||
Y92C3B.2d | ||||||
Corresponding_protein | WP:CE25626 | |||||
WP:CE27339 | ||||||
WP:CE29149 | ||||||
WP:CE30403 | ||||||
KOG | KOG0120 | |||||
Corresponding_RNAi_reagent | Cenix:191-g9 | |||||
mv_AAC26982 | ||||||
Experimental_info | RNAi_result | Cenix:191-g9 | ||||
WB_RNAi_result | MV_SV:mv_AAC26982 | |||||
Cenix:191-g9 | ||||||
Expr_pattern | Expr1616 | |||||
Y2H_bait (75) | ||||||
Y2H_target | Y2H008297 | |||||
Reference (7) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |