Y92C3B.2 | SMap | S_parent | Sequence | Y92C3B
|
| Chromosome | III |
|
Identity (5)
|
|
Gene_info
| Gene_class | uaf
|
| | Allele | gk392
| Inferred_automatically | From strain object: VC720 |
| | Strain | VC720
|
| |
GO_term (8)
|
| | Contained_in_operon | CEOP3052
|
| |
Structured_description
| Provisional_description | uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor and is a homolog of mammalian and fly U2AF65; UAF-1 has been shown to bind RNA and this binding is enhanced by UAF-2; the abundance of one alternative transcript appears to be increased during starvation and this transcript is retained in the nucleus; uaf-1 affects embryonic viability, based on RNAi analysis. |
Paper_evidence (4)
|
| | | | | Person_evidence | WBPerson48
|
| | | | | Curator_confirmed | WBPerson48
|
| | | | | Date_last_updated | 07 Jan 2005 00:00:00 |
| | | Concise_description | uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor and is a homolog of mammalian and fly U2AF65; UAF-1 has been shown to bind RNA and this binding is enhanced by UAF-2; the abundance of one alternative transcript appears to be increased during starvation and this transcript is retained in the nucleus; uaf-1 affects embryonic viability, based on RNAi analysis. |
| | |
Sequence_features
| uaf-1 encodes the large subunit of U2AF, the U2 small nuclear ribonucleoparticle (snRNP) auxiliary factor. | Paper_evidence | WBPaper00002652
|
| | | | | Curator_confirmed | WBPerson48
|
| | | | UAF-1 is a homolog of mammalian and fly U2AF65. | Paper_evidence | WBPaper00003474
|
| | | | | Curator_confirmed | WBPerson48
|
| | | Functional_pathway | uaf-1 affects embryonic viability, based on RNAi analysis. | Paper_evidence | WBPaper00003463
|
| | | | | Curator_confirmed | WBPerson48
|
| | | Functional_physical_interaction | UAF-1 has been shown to bind DNA and this binding is enhanced by UAF-2. | Paper_evidence | WBPaper00003836
|
| | | | | Curator_confirmed | WBPerson48
|
| | | Expression | The abundance of one alternative transcript for uaf-1 appears to be increased during starvation and this transcript is retained in the nucleus. | Paper_evidence | WBPaper00003474
|
| | | | | Curator_confirmed | WBPerson48
|
|
Molecular_info
|
Corresponding_CDS
| Y92C3B.2a
|
| | | Y92C3B.2b
|
| | | Y92C3B.2c
|
| | | Y92C3B.2d
|
| |
Corresponding_protein (4)
|
| | KOG | KOG0120
|
| |
Corresponding_RNAi_reagent
| Cenix:191-g9
|
| | | mv_AAC26982
|
|
Experimental_info (5)
|
|
Reference (7)
|
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission |
| Method | Gene
|