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CDS: ZC395.6
| ZC395.6 | SMap | S_parent | Sequence | ZC395 | |
|---|---|---|---|---|---|
| Structure | Source_exons (9) | ||||
| DB_info | Database | TREMBL | Q9GYG3_CAEEL | ||
| TrEMBL_AC | Q9GYG3 | ||||
| NDB | GI_number | 17976553 | |||
| Protein_id | ZC395 | AAG00042 | 2 | ||
| DB_remark | C. elegans GRO-1 protein; contains similarity to Pfam domain PF01715 (IPP transferase)contains similarity to Interpro domains IPR002627 (tRNA isopentenyltransferase), IPR007087 (Zinc finger, C2H2-type), IPR011593 (Isopentenyl transferase-like) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | ZC395.6 | |||
| Corresponding_transcript | ZC395.6 | ||||
| Corresponding_protein | WP:CE30119 | ||||
| Corresponding_PCR_product (5) | |||||
| Corresponding_RNAi_reagent | Cenix:301-a7 | ||||
| sjj_ZC395.6 | |||||
| TH:301A7 | |||||
| Matching_cDNA | OSTR050B2_1 | Inferred_automatically | transcript_builder.pl | ||
| yk747e12.3 | Inferred_automatically | transcript_builder.pl | |||
| AY052773 | Inferred_automatically | transcript_builder.pl | |||
| yk747e12.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | JA:ZC395.6 | ||||
| TH:301A7 | |||||
| Cenix:301-a7 | |||||
| WB_RNAi_result | TH:301A7 | ||||
| JA:ZC395.6 | |||||
| MV_SV:mv_ZC395.6 | |||||
| Cenix:301-a7 | |||||
| GO_term (6) | |||||
| Variation | e2400 | ||||
| ok942 | |||||
| Microarray_results | SMD_ZC395.6:2 | ||||
| SMD_ZC395.6 | |||||
| 188896_at | |||||
| Aff_ZC395.6 | |||||
| Brief_identification | tRNA isopentenyltransferase | ||||
| Remark | last 3 exons may be separate gene, since the homology does not extend into that region | ||||
| the initiator ATG was move 42 bases 5' based on patented documentation of Siegfried Heikimi communicated by Steve Jones - 20000322 - js | |||||
| SL2 trans-spliced; see yk747e12.5 | |||||
| Associated_feature | WBsf015821 | ||||
| Method | curated |
