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CDS: ZC404.8
| ZC404.8 | SMap | S_parent | Sequence | ZC404 | |
|---|---|---|---|---|---|
| Structure | Source_exons (5) | ||||
| DB_info | Database | TREMBL | Q23287_CAEEL | ||
| TrEMBL_AC | Q23287 | ||||
| NDB | GI_number | 1280052 | |||
| NCBI | RefSeq | NM_072316 | |||
| Protein_id | ZC404 | AAA97963 | 1 | ||
| DB_remark | C. elegans SPN-4 protein; contains similarity to Pfam domain PF00076 (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain))contains similarity to Interpro domains IPR012677 (Nucleotide-binding, alpha-beta plait), IPR000504 (RNA-binding region RNP-1 (RNA recognition motif)) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Gene_regulation | Trans_regulator | cgc5160_pal-1.e | |||
| Visible | Gene | ZC404.8 | |||
| Corresponding_transcript | ZC404.8 | ||||
| Corresponding_protein | WP:CE07598 | ||||
| Corresponding_PCR_product | cenix:28-f1 | ||||
| mv_ZC404.8 | |||||
| sjj_ZC404.8 | |||||
| Corresponding_RNAi_reagent | Cenix:28-f1 | ||||
| sjj_ZC404.8 | |||||
| Matching_cDNA | yk222c1.5 | Inferred_automatically | transcript_builder.pl | ||
| yk557h1.5 | Inferred_automatically | transcript_builder.pl | |||
| yk124e5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk125h3.5 | Inferred_automatically | transcript_builder.pl | |||
| yk542f7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk264b5.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1544a06.3 | Inferred_automatically | transcript_builder.pl | |||
| yk125h3.3 | Inferred_automatically | transcript_builder.pl | |||
| yk574b3.3 | Inferred_automatically | transcript_builder.pl | |||
| yk455e12.3 | Inferred_automatically | transcript_builder.pl | |||
| CEESS03F | Inferred_automatically | transcript_builder.pl | |||
| yk458c6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk102b7.3 | Inferred_automatically | transcript_builder.pl | |||
| yk469g6.5 | Inferred_automatically | transcript_builder.pl | |||
| yk222c1.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1567f06.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTR195A6_1 | Inferred_automatically | transcript_builder.pl | |||
| yk727d12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk102b7.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1714g04.3 | Inferred_automatically | transcript_builder.pl | |||
| yk455e12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk264b5.3 | Inferred_automatically | transcript_builder.pl | |||
| CEESU67F | Inferred_automatically | transcript_builder.pl | |||
| yk458c6.3 | Inferred_automatically | transcript_builder.pl | |||
| yk393d1.3 | Inferred_automatically | transcript_builder.pl | |||
| yk847c01.3 | Inferred_automatically | transcript_builder.pl | |||
| yk124e5.3 | Inferred_automatically | transcript_builder.pl | |||
| yk727d12.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTF195A6_1 | Inferred_automatically | transcript_builder.pl | |||
| yk568b11.3 | Inferred_automatically | transcript_builder.pl | |||
| yk1714g04.5 | Inferred_automatically | transcript_builder.pl | |||
| yk542f7.3 | Inferred_automatically | transcript_builder.pl | |||
| AB052819 | Inferred_automatically | transcript_builder.pl | |||
| yk381d10.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1567f06.5 | Inferred_automatically | transcript_builder.pl | |||
| yk847c01.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | Cenix:28-f1 | ||||
| JA:ZC404.8 | |||||
| WB_RNAi_result | JA:ZC404.8 | ||||
| [cgc5194]:gei-20 | |||||
| MV_SV:mv_ZC404.8 | |||||
| Cenix:28-f1 | |||||
| GO_term | GO:0009792 | IMP | Inferred_automatically | ||
| GO:0000166 | IEA | Inferred_automatically | |||
| GO:0003676 | IEA | Inferred_automatically | |||
| Variation (6) | |||||
| Microarray_results | SMD_ZC404.8 | ||||
| 174082_at | |||||
| 192036_at | |||||
| Brief_identification | RNA-binding protein | ||||
| Remark | SL1 trans-spliced; see yk847c01.5 | ||||
| Associated_feature | WBsf015015 | ||||
| Method | curated |
