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CDS: ZK1290.3b
| ZK1290.3b | SMap | S_parent | Sequence | ZK1290 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 168 | ||
| 255 | 676 | ||||
| 869 | 1050 | ||||
| 1101 | 1126 | ||||
| DB_info | Database | SwissProt | SwissProt_ID | COL6_CAEEL | |
| SwissProt_AC | P18831 | ||||
| NDB | GI_number | 24418244 | |||
| NCBI | RefSeq | NM_182112 | |||
| Protein_id | ZK1290 | AAB93312 | 3 | ||
| DB_remark | C. elegans ROL-8 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform (2) | |||||
| Visible | Gene | ZK1290.3 | |||
| Corresponding_transcript | ZK1290.3b | ||||
| Corresponding_protein | WP:CE32085 | ||||
| Corresponding_PCR_product | cenix:64-a1 | ||||
| mv_AAA27991 | |||||
| sjj_ZK1290.3 | |||||
| smd_col-6_2 | |||||
| Corresponding_RNAi_reagent | Cenix:64-a1 | ||||
| sjj_ZK1290.3 | |||||
| Matching_cDNA | yk787b08.3 | Inferred_automatically | transcript_builder.pl | ||
| RNAi_result | Cenix:64-a1 | ||||
| JA:ZK1290.3 | |||||
| WB_RNAi_result | JA:ZK1290.3 | ||||
| MV_SV:mv_AAA27991 | |||||
| Cenix:64-a1 | |||||
| GO_term | GO:0042302 | IEA | Inferred_automatically | ||
| GO:0006817 | IEA | Inferred_automatically | |||
| GO:0005737 | IEA | Inferred_automatically | |||
| Microarray_results | SMD_ZK1290.3 | ||||
| 192968_s_at | |||||
| Aff_ZK1290.3 | |||||
| Method | curated |
