CDS: ZK1290.3b
ZK1290.3b | SMap | S_parent | Sequence | ZK1290 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 168 | ||
255 | 676 | ||||
869 | 1050 | ||||
1101 | 1126 | ||||
DB_info | Database | SwissProt | SwissProt_ID | COL6_CAEEL | |
SwissProt_AC | P18831 | ||||
NDB | GI_number | 24418244 | |||
NCBI | RefSeq | NM_182112 | |||
Protein_id | ZK1290 | AAB93312 | 3 | ||
DB_remark | C. elegans ROL-8 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | AU212584 | ||
Inferred_automatically | transcript_builder | ||||
Visible | Gene | ZK1290.3 | |||
Corresponding_transcript | ZK1290.3b | ||||
Corresponding_protein | WP:CE32085 | ||||
Corresponding_PCR_product | cenix:64-a1 | ||||
mv_AAA27991 | |||||
sjj_ZK1290.3 | |||||
smd_col-6_2 | |||||
Corresponding_RNAi_reagent | Cenix:64-a1 | ||||
sjj_ZK1290.3 | |||||
Matching_cDNA | yk787b08.3 | Inferred_automatically | transcript_builder.pl | ||
RNAi_result (2) | |||||
WB_RNAi_result | JA:ZK1290.3 | ||||
MV_SV:mv_AAA27991 | |||||
Cenix:64-a1 | |||||
GO_term | GO:0042302 | IEA | Inferred_automatically | ||
GO:0006817 | IEA | Inferred_automatically | |||
GO:0005737 | IEA | Inferred_automatically | |||
Microarray_results | SMD_ZK1290.3 | ||||
192968_s_at | |||||
Aff_ZK1290.3 | |||||
Method | curated |