CDS: ZK637.9b
ZK637.9b | SMap | S_parent | Sequence | ZK637 | ||
---|---|---|---|---|---|---|
Structure | Source_exons (5) | |||||
DB_info | Database | SwissProt (2) | ||||
NDB | GI_number | 58081968 | ||||
Protein_id | ZK637 | CAI46594 | 1 | |||
DB_remark | C. elegans TPK-1 protein; contains similarity to Pfam domains PF04265 (Thiamin pyrophosphokinase, vitamin B1 binding domain), PF04263 (Thiamin pyrophosphokinase, catalytic domain)contains similarity to Interpro domains IPR007371 (Thiamin pyrophosphokinase, catalytic region), IPR006282 (Thiamine pyrophosphokinase) | |||||
Origin (2) | ||||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | CB386472 | |||
Visible | Gene | ZK637.9 | ||||
Corresponding_transcript | ZK637.9b | |||||
Corresponding_protein | WP:CE37947 | |||||
Corresponding_PCR_product (4) | ||||||
Corresponding_RNAi_reagent (2) | ||||||
Matching_cDNA | OSTF055H6_1 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:307-f12 | |||||
TH:307F12 | ||||||
WB_RNAi_result | TH:307F12 | |||||
MV_SV:mv_ZK637.9 | ||||||
Cenix:307-f12 | ||||||
GO_term | GO:0004788 | IEA | Inferred_automatically | |||
GO:0006772 | IEA | Inferred_automatically | ||||
GO:0005524 | IEA | Inferred_automatically | ||||
GO:0009229 | IEA | Inferred_automatically | ||||
Variation | qm162 | |||||
Microarray_results | SMD_ZK637.9 | |||||
186669_at | ||||||
Aff_ZK637.9 | ||||||
Remark | [030508 pad] Gene model changed on basis of OST data, extending exon 3 - 3'. | |||||
[050104 pad] Gene prediction entered to follow OST data that suggests alternate splicing of exon 3 when compared to mRNA data. | Accession_evidence | NDB | CB386472 | |||
Method | curated |