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Gene/ORF R07E5.3 Ace View of R07E5.3
R07E5.3 Details Help
Description  The R07E5.3 gene encodes a homolog of SNF5/Ini1, a component of the SWI/SNF complex that is conserved from yeast to mammals and that is involved in chromatin remodeling; R07E5.3 may be involved in asymmetric cell division of the T cells.
Homology Group (KOG)  SWI-SNF chromatin remodeling complex, Snf5 subunit
GO Terms  chromatin modeling (GO:0006338) ; nuclear chromosome (GO:0000228)
Location   III:4404355..4407631
RNAi Phenotypes
Postembryonic Slu ; WT_postembryonic_morphology
Larva Let
Adult Egl ; Pvl ; Ste ; Ste ; Rup
External Links  wormbase.org NCBI.org NBrowse
Associated RNAi Experiments View Summary
Cenix:313-g1
Adult Phenotypes  WT
RNAi Reagent Name & Type Cenix:313-g1 (PCR reagent)
Delivery Method  Injection
Remark  wild type
Laboratory  TH
Date  2005-3-24
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
JA:R07E5.14
Embryonic Phenotypes  Emb Penetrance 100 %
Adult Phenotypes  Pvl
Rup
Ste
RNAi Reagent Name & Type sjj_R07E5.14 (PCR reagent)
Laboratory  JA
Date  2003-1-10
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
JA:R07E5.3
Embryonic Phenotypes  Emb Penetrance 100 %
Adult Phenotypes  Egl
Adult Phenotypes  Slu
RNAi Reagent Name & Type sjj_R07E5.3 (PCR reagent)
Laboratory  JA
Date  2003-1-10
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
PF:GL1_8E7
Embryonic Phenotypes  Emb Penetrance 100 %
RNAi Reagent Name & Type sjj_R07E5.3 (PCR reagent)
Delivery Method  Injection
Remark  PCR product contains flanking T7 promoter sequences
Laboratory  KK
Date  2002-11-19
Reference  Piano et al. (2002) Curr Biol "Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans"
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Simmer:R07E5.14
Embryonic Phenotypes  Emb Penetrance 100 %
RNAi Reagent Name & Type sjj_R07E5.14 (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:R07E5.3
Embryonic Phenotypes  Emb Penetrance 100 %
RNAi Reagent Name & Type sjj_R07E5.3 (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
TH:300F3
Embryonic Phenotypes  Emb Penetrance None reported
RNAi Reagent Name & Type TH:300F3 (PCR reagent)
Remark  Phenotype comment -- Not yet confirmed by independent RNA
Laboratory  TH
Date  2000-11-16
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
TH:313G1
Adult Phenotypes  WTDIC phenotype -- Embryonic development normal
RNAi Reagent Name & Type TH:313G1 (PCR reagent)
Delivery Method  Injection
Laboratory  TH
Date  2000-11-16
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Cenix:300-f3
Embryonic Phenotypes  Emb Penetrance None reported
Adult Phenotypes  WT_postembryonic_morphology
RNAi Reagent Name & Type Cenix:300-f3 (PCR reagent)
Delivery Method  Injection
Remark  early embryonic: Clear cut.
Laboratory  TH
Date  2005-3-24
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Gene Plot of R07E5.3 Browse using GBrowse
Gene Map