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Gene/ORF T28C6.6 (col-3) Ace View of T28C6.6
T28C6.6 Details Help
Description  col-3 encodes a collagen protein that affects body morphogenesis, larval viability, and locomotion in large scale RNAi screens; mRNA is expressed during all developmental stages examined (in embryos, during the L2 to dauer molt, during the dauer to L4 larval molt, and during the L4 to adult molt).
Homology Group (KOG)  Collagens (type IV and type XIII), and related proteins
GO Terms  structural constituent of cuticle (GO:0042302) ; phosphate transport (GO:0006817) ; cytoplasm (GO:0005737)
Location   IV:8824384..8826398
RNAi Phenotypes
Postembryonic Larval Lethal-Early (L1/L2)
Larva Lva ; Lvl ; Lvl
Adult Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Dpy ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Bmd ; Rup ; Unc ; Unc ; Unc ; Unc ; Unc ; Unc ; Unc ; Unc ; Unc ; Unc
External Links  wormbase.org NCBI.org NBrowse
Associated RNAi Experiments View Summary
JA:T28C6.6
Adult Phenotypes  WT
RNAi Reagent Name & Type sjj_T28C6.6 (PCR reagent)
Laboratory  JA
Date  2003-1-10
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Simmer:T28C6.6:Repeat_a
Larval Phenotypes  Lvl
Adult Phenotypes  Bmd
Dpy
Unc
RNAi Reagent Name & Type sjj_T28C6.6 (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:T28C6.6:Screen
Adult Phenotypes  Bmd
Dpy
Unc
RNAi Reagent Name & Type sjj_T28C6.6 (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
[cgc5655]:T28C6.6
Adult Phenotypes  Unclassified lipid metabolism abnormal
RNAi Reagent Name & Type sjj_T28C6.6 (PCR reagent)
Delivery Method  Bacterial_feeding
Laboratory  GR
Date  2003-1-10
Reference  Ashrafi K et al. (2003) Nature "Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory ...."
Gene Plot of T28C6.6 Browse using GBrowse
Gene Map