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Gene/ORF Y38F2AL.4 (vha-3) Ace View of Y38F2AL.4
Y38F2AL.4 Details Help
Description  vha-3 encodes a 16-kDa proteolipid of the vacuolar-type H+-ATPase (V-ATPase) not required for embryonic viability; VHA-3 is 100% identical to VHA-2 with respect to amino acid sequence; expressed predominantly in the gastrointestinal and hypodermal cells and also in the excretory cell.
GO Terms  embryonic development (GO:0009790) ; hydrogen-transporting ATPase V0 domain (GO:0000220) ; hydrogen-transporting ATP synthase activity, rotational mechanism (GO:0046933) ; hydrogen-transporting ATPase activity, rotational mechanism (GO:0046961) ; ATP synthesis coupled proton transport (GO:0015986) ; membrane (GO:0016020) ; proton-transporting two-sector ATPase complex (GO:0016469) ; integral to membrane (GO:0016021)
Location   IV:2314188..2316387
RNAi Phenotypes
Larva Let ; Lva ; Lva ; Lva ; Lvl ; Gro ; Gro
Adult Sck ; Pvl ; Sma ; Unc ; Stp
External Links  wormbase.org NCBI.org NBrowse
Associated RNAi Experiments View Summary
Cenix:213-h12
Adult Phenotypes  WT
RNAi Reagent Name & Type Cenix:213-h12 (PCR reagent)
Delivery Method  Injection
Remark  Wildtype results in all three tests.
Laboratory  TH
Date  2005-3-24
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Simmer:Y38F2A_5743.e
Embryonic Phenotypes  Emb Penetrance 20 - 40 %
Larval Phenotypes  Gro
Adult Phenotypes  Unc
RNAi Reagent Name & Type sjj_Y38F2A_5743.e (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y38F2A_5743.i
Embryonic Phenotypes  Emb Penetrance 20 - 40 %
Larval Phenotypes  Lva
Lvl
RNAi Reagent Name & Type sjj_Y38F2A_5743.i (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
JA:Y38F2A_5743.f
Embryonic Phenotypes  Emb Penetrance 80 %
Larval Phenotypes  Gro
Adult Phenotypes  Sck
Sma
Stp brood size (1 out of 5)
RNAi Reagent Name & Type sjj_Y38F2A_5743.f (PCR reagent)
Laboratory  JA
Date  2003-1-10
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Simmer:Y38F2A_5743.f
Embryonic Phenotypes  Emb Penetrance 50 - 80 %
Larval Phenotypes  Lva
RNAi Reagent Name & Type sjj_Y38F2A_5743.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Gene Plot of Y38F2AL.4 Browse using GBrowse
Gene Map