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Gene/ORF Y47G6A.10 (spg-7) Ace View of Y47G6A.10
Y47G6A.10 Details Help
Homology Group (KOG)  AAA+-type ATPase containing the peptidase M41 domain
GO Terms  nucleotide binding (GO:0000166) ; nucleoside triphosphatase activity (GO:0017111) ; ATP binding (GO:0005524) ; metalloendopeptidase activity (GO:0004222) ; protein catabolism (GO:0030163) ; membrane (GO:0016020) ; zinc ion binding (GO:0008270) ; integral to membrane (GO:0016021) ; proteolysis and peptidolysis (GO:0006508)
Location   I:3466733..3478372
RNAi Phenotypes
Early_embryo Ocs
Postembryonic WT_postembryonic_morphology
Larva Lva ; Lva ; Lva ; Lva ; Gro
Adult Ste ; Ste ; Ste ; Ste ; Ste
External Links  wormbase.org NCBI.org NBrowse
Associated RNAi Experiments View Summary
JA:Y47G6A_247.f
Embryonic Phenotypes  Emb Penetrance 100 %
Adult Phenotypes  Ste brood size range (1 out of 5)
RNAi Reagent Name & Type sjj_Y47G6A_247.f (PCR reagent)
Laboratory  JA
Date  2000-11-16
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
JA:Y47G6A_247.g
Embryonic Phenotypes  Emb Penetrance 100 %
Larval Phenotypes  Lva
Adult Phenotypes  Ocs 1-12 cell arrest
RNAi Reagent Name & Type sjj_Y47G6A_247.g (PCR reagent)
Laboratory  JA
Date  2000-11-16
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif
Simmer:Y47G6A_247.f:Screen_A
Embryonic Phenotypes  Emb Penetrance 20 - 40 %
Larval Phenotypes  Lva
Adult Phenotypes  Ste brood size (6 out of 10)
RNAi Reagent Name & Type sjj_Y47G6A_247.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y47G6A_247.f:Screen_B
Embryonic Phenotypes  Emb Penetrance 20 - 40 %
Larval Phenotypes  Lva
RNAi Reagent Name & Type sjj_Y47G6A_247.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y47G6A_247.g:Screen_A
Embryonic Phenotypes  Emb Penetrance 50 - 80 %
Larval Phenotypes  Lva
Adult Phenotypes  Ste brood size (6 out of 10)
RNAi Reagent Name & Type sjj_Y47G6A_247.g (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y47G6A_247.g:Screen_B
Larval Phenotypes  Gro
RNAi Reagent Name & Type sjj_Y47G6A_247.g (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Cenix:76-d12
Embryonic Phenotypes  Emb Penetrance None reported
Adult Phenotypes  WT_postembryonic_morphology
RNAi Reagent Name & Type Cenix:76-d12 (PCR reagent)
Delivery Method  Injection
Remark  early embryonic: No significant defects.
Laboratory  TH
Date  2005-3-24
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Gene Plot of Y47G6A.10 Browse using GBrowse
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