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Gene/ORF Y47G6A.20 (rnp-6) Ace View of Y47G6A.20
Y47G6A.20 Details Help
Description  rnp-6 encodes an ortholog of HALF-PINT in D. melanogaster and FBP Interacting Repressor (FIR)/PUF60 in mammals, predicted to be involved in mRNA splicing regulation, mRNA localization, or transcriptional regulation via TFIIH.
GO Terms  nucleotide binding (GO:0000166) ; nucleic acid binding (GO:0003676)
Location   I:3539218..3547306
RNAi Phenotypes
Postembryonic WT_postembryonic_morphology
Larva Let ; Lvl ; Gro
Adult Pvl ; Ste
External Links  wormbase.org NCBI.org NBrowse
Associated RNAi Experiments View Summary
JA:Y47G6A_245.f
Adult Phenotypes  WT
RNAi Reagent Name & Type sjj_Y47G6A_245.f (PCR reagent)
Laboratory  JA
Date  2000-11-16
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
JA:Y47G6A_245.g
Adult Phenotypes  WT
RNAi Reagent Name & Type sjj_Y47G6A_245.g (PCR reagent)
Laboratory  JA
Date  2000-11-16
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Simmer:Y47G6A_245.f:Repeat_b
Embryonic Phenotypes  Emb Penetrance 50 - 80 %
RNAi Reagent Name & Type sjj_Y47G6A_245.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y47G6A_245.f:Screen_A
Adult Phenotypes  WT
RNAi Reagent Name & Type sjj_Y47G6A_245.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Simmer:Y47G6A_245.f:Screen_B
Embryonic Phenotypes  Emb Penetrance 100 %
Larval Phenotypes  Gro
RNAi Reagent Name & Type sjj_Y47G6A_245.f (PCR reagent)
Laboratory  NL
Date  2003-10-01
Strain  NL4256 rrf-3(pk1426)
Reference  Simmer F et al. (2003) PLoS Biology "Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals ...."
Cenix:90-g11
Embryonic Phenotypes  Emb Penetrance None reported
Adult Phenotypes  WT_postembryonic_morphology
RNAi Reagent Name & Type Cenix:90-g11 (PCR reagent)
Delivery Method  Injection
Remark  early embryonic: No significant defects.
Laboratory  TH
Date  2005-3-24
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
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