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RNAi Experiment: [cgc5482]:cyp-1_cyp-5:1 Ace View of [cgc5482]:cyp-1_cyp-5:1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49A3A.5 (cyn-1)
Description of "Y49A3A.5"  cyp-1 encodes a functional cyclophilin that is predicted to be secreted; expression increases as worms progress from the L1 larval stage to the adult stage.
KOG Annotation  Cyclophilin type peptidyl-prolyl cis-trans isomerase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:14358670..14359311)
Transcript overlap: 579 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 474
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49A3A.5" Links  Wormbase NCBI
[cgc5482]:cyp-1_cyp-5:1 Phenotypes Help with Phenotypes
Phenotype  WT
[cgc5482]:cyp-1_cyp-5:1 Experiment Details Ace View
RNAi Reagent & Type  [cgc5482]:cyp-1 (PCR_reagent)
Strain  WT
Reference  Picken NC et al. (2002) Journal of Molecular Biology "Structural and biological characterisation of the gut-associated cyclophilin ...."
Delivery Method  Injection
Date  2002-7-11
Gene Plot of Y49A3A.5 Browse using GBrowse
Gene Graph