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RNAi Experiment: [cgc5655]:T02G5.4 Ace View of [cgc5655]:T02G5.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T02G5.4
KOG Annotation  Acetyl-CoA acetyltransferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:7082694..7083782)
Transcript overlap: 773 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 668
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.834
Wormbase (BLAST) RNAi secondary
External "T02G5.4" Links  Wormbase NCBI
Gene Inhibited  T02G5.8 (kat-1)
Description of "T02G5.8"  kat-1 encodes a homolog of the human gene ACAT1, which when mutated leads to alpha-methylacetoaceticaciduria (OMIM:203750).
KOG Annotation  Acetyl-CoA acetyltransferase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 133
Relative score: 0.199 (Best raw score= for Gene )
Specificity index: 0.166
Wormbase (BLAST) RNAi primary
External "T02G5.8" Links  Wormbase NCBI
[cgc5655]:T02G5.4 Phenotypes Help with Phenotypes
Phenotype  Unclassified lipid metabolism abnormal
[cgc5655]:T02G5.4 Experiment Details Ace View
Laboratory  GR
RNAi Reagent & Type  sjj_T02G5.4 (PCR_reagent)
Reference  Ashrafi K et al. (2003) Nature "Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory ...."
Delivery Method  Bacterial_feeding
Date  2003-1-10
Gene Plot of T02G5.4 Browse using GBrowse
Gene Graph
Gene Plot of T02G5.8 Browse using GBrowse
Gene Graph