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RNAi Experiment: [cgc5655]:tph-1:D2089.2 Ace View of [cgc5655]:tph-1:D2089.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  D2089.2
Description of "D2089.2"  Associated GO Term : ubiquitin-protein ligase activity
KOG Annotation  Protein involved in mRNA turnover and stability
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:10659809..10660909)
Transcript overlap: 543 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 459
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.829
Wormbase (BLAST) RNAi primary
External "D2089.2" Links  Wormbase NCBI
Gene Inhibited  D2089.1 (rsp-7)
Description of "D2089.1"  Associated GO Term : nucleotide binding
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (II:10659809..10660909)
Transcript overlap: 177 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 131
Relative score: 0.207 (Best raw score= for Gene )
Specificity index: 0.171
Wormbase (BLAST) RNAi primary
External "D2089.1" Links  Wormbase NCBI
[cgc5655]:tph-1:D2089.2 Phenotypes Help with Phenotypes
Phenotype  Unclassified lipid metabolism abnormal
[cgc5655]:tph-1:D2089.2 Experiment Details Ace View
Laboratory  GR
RNAi Reagent & Type  sjj_D2089.2 (PCR_reagent)
Strain  tph-1(mg280)
Reference  Ashrafi K et al. (2003) Nature "Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory ...."
Delivery Method  Bacterial_feeding
Date  2003-1-10
Gene Plot of D2089.2 Browse using GBrowse
Gene Graph
Gene Plot of D2089.1 Browse using GBrowse
Gene Graph