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RNAi Experiment: [cgc5655]:tub-1:C38C10.1 Ace View of [cgc5655]:tub-1:C38C10.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C38C10.1 (tkr-1)
Description of "C38C10.1"  tkr-1 encodes a G protein-coupled receptor that is the C. elegans tachykinin-like neuropeptide receptor homolog; by homology, TKR-1 is predicted to function in modulation of excitatory neurotransmission; as loss of tkr-1 activity via RNAi results in moderate reduction of fat content, TKR-1 may play a specific role in regulating lipid metabolism; a tkr-1 reporter gene fusion is reportedly expressed in the socket cells of the deirid and post-deirid sensilla from the L2 larval stage through adulthood.
KOG Annotation  G protein-coupled receptor
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9385538..9387140)
Transcript overlap: 866 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 740
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C38C10.1" Links  Wormbase NCBI
[cgc5655]:tub-1:C38C10.1 Phenotypes Help with Phenotypes
Phenotype  WTRNAi causes no change in fat content
[cgc5655]:tub-1:C38C10.1 Experiment Details Ace View
Laboratory  GR
RNAi Reagent & Type  sjj_C38C10.1 (PCR_reagent)
Strain  tub-1(nr2004)
Reference  Ashrafi K et al. (2003) Nature "Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory ...."
Delivery Method  Bacterial_feeding
Date  2003-1-10
Gene Plot of C38C10.1 Browse using GBrowse
Gene Graph