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RNAi Experiment: Cenix:10-g11 Ace View of Cenix:10-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C41G7.2 (klp-16)
Description of "C41G7.2"  klp-16 encodes a C-terminal motor kinesin orthologous to the Drosophila melanogaster Ncd and Saccharomyces cerevisiae Kar3; however KLP-16 along with KLP-3, KLP-15 and KLP-17 form an unique subgroup based on amino acid sequence and secondary structure analysis; klp-16 is involved in development of the nervous system in embryos and in chromosome segregation; in situ RNA hybridization experiments indicate that klp-16 is localized in the anterior nervous system in the head region of late embryos.
KOG Annotation  Kinesin (KAR3 subfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9513022..9513656)
Transcript overlap: 587 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 545
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.876
Wormbase (BLAST) RNAi primary
External "C41G7.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  M01E11.6 (klp-15)
Description of "M01E11.6"  Associated GO Term : microtubule motor activity
KOG Annotation  Kinesin (KAR3 subfamily)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.141 (Best raw score= for Gene )
Specificity index: 0.124
Wormbase (BLAST) RNAi secondary
External "M01E11.6" Links  Wormbase NCBI Phenobank 1
Cenix:10-g11 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Passage Through Meiosis defective
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Help
Cenix:10-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:10-g11 (PCR_reagent)
Remark  early embryonic: Polar Body Extrusion
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C41G7.2 Browse using GBrowse
Gene Graph
Gene Plot of M01E11.6 Browse using GBrowse
Gene Graph