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RNAi Experiment: Cenix:101-d11 Ace View of Cenix:101-d11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y38A8.1 (ndx-3)
Description of "Y38A8.1"  The ndx-3 gene encodes a homolog of peroxisomal CoA diphosphatases in both S. cerevisiae (PCD1) and C. elegans (NDX-8); more generally, NDX-3 protein belongs to the family of NUDIX hydrolases.
KOG Annotation  Peroxisomal NUDIX hydrolase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:4953736..4954464)
Transcript overlap: 592 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 550
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y38A8.1" Links  Wormbase NCBI Phenobank 1
Cenix:101-d11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:101-d11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:101-d11 (PCR_reagent)
Remark  3/3 tests are wt
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y38A8.1 Browse using GBrowse
Gene Graph