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RNAi Experiment: Cenix:11-h10 Ace View of Cenix:11-h10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T25G3.3
KOG Annotation  NMD protein affecting ribosome stability and mRNA decay
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:7559844..7560664)
Transcript overlap: 660 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 598
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T25G3.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T25G3.2 (chs-1)
Description of "T25G3.2"  chi-1 encodes a putative chitin synthase, most closely related to chitin synthases characterized in filarial nematodes.
Evidence for Inhibition 
ePCR Transcript overlap: 5 nt Explain types of evidence for RNAi inhibition
External "T25G3.2" Links  Wormbase NCBI Phenobank 1
Cenix:11-h10 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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hosting these data.)
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Cenix:11-h10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:11-h10 (PCR_reagent)
Remark  60-80% of the F1 progeny dies during embryonic development, escapers arrest at L2/L3 stage.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T25G3.2 Browse using GBrowse
Gene Graph
Gene Plot of T25G3.3 Browse using GBrowse
Gene Graph