RNAi Experiment: Cenix:113-f3 |
Ace View of Cenix:113-f3
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Genes Inhibited |
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Gene Inhibited |
Y116A8C.43 |
Evidence for Inhibition |
ePCR |
Status: Unique_ePCR (IV:17088726..17089936)
Transcript overlap: 612 nt |
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Sliding Window |
Raw score: 528
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene) |
Wormbase (BLAST) |
RNAi primary |
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External "Y116A8C.43" Links |
1 |
Gene Inhibited |
Y116A8C.42 (snr-1) |
Description of "Y116A8C.42" |
snr-1 encodes an ortholog of human small nuclear ribonucleoprotein Sm D3, a protein that forms part of a heptameric complex required for the biogenesis and function of the snRNPs that catalyze mRNA splicing; in combination with the gene that encodes the human Sm B ortholog (snr-2) snr-1 affects embryonic viability and the nuclear association and localization of P granules in embryos based on an RNAi assay, and also affects embryonic viability, growth, and fertility based on large-scale RNAi assays; snr-1 is expressed in embryos and is expressed in larvae and adults in muscles of the alimentary system, in body-wall muscle, in seam cells and other unidentified cells in larvae and in adults. |
KOG Annotation  |
Small nuclear ribonucleoprotein Sm D3
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Evidence for Inhibition |
ePCR |
Transcript overlap: 66 nt |
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External "Y116A8C.42" Links |
1 |
Cenix:113-f3 Phenotypes |
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Phenotype |
WT
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Cenix:113-f3 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
Cenix:113-f3 (PCR_reagent) |
Remark |
3/3 tests show wild type results. |
Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
Delivery Method |
Injection |
Date |
2005-3-24 |
Gene Plot of Y116A8C.43 |
Browse using GBrowse
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Gene Plot of Y116A8C.42 |
Browse using GBrowse
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