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RNAi Experiment: Cenix:116-b12 Ace View of Cenix:116-b12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T28H10.1
Description of "T28H10.1"  Associated GO Term : magnesium ion binding
KOG Annotation  Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:12506374..12507934)
Transcript overlap: 900 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 774
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.926
Wormbase (BLAST) RNAi primary
External "T28H10.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T28H10.4
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:12506374..12507934)
Transcript overlap: 83 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 62
Relative score: 0.08 (Best raw score= for Gene )
Specificity index: 0.074
Wormbase (BLAST) RNAi primary
External "T28H10.4" Links  Wormbase NCBI Phenobank 1
Cenix:116-b12 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:116-b12 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:116-b12 (PCR_reagent)
Remark  3/3 tests are wildtype.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T28H10.4 Browse using GBrowse
Gene Graph
Gene Plot of T28H10.1 Browse using GBrowse
Gene Graph