Link to C18E3.2.1Link to C18E3.2.2Link to C18E3.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K03B8.4Link to C40H5.8geneMap Link to K03B8.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentLink to C40H5.8Link to C18E3.2.2Link to C18E3.2.1geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F59E12.5bLink to F59E12.5a.1Link to F59E12.4aLink to F59E12.4bLink to F59E12.5a.2Link to C18E3.2.2Link to C18E3.2.1Link to K03B8.4geneMap
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RNAi Experiment: Cenix:12-f4 Ace View of Cenix:12-f4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C18E3.2
Description of "C18E3.2"  The C18E3.2 gene encodes a homolog of Swp73/BAF60, a component of the SWI/SNF complex that is conserved from yeast to mammals and that is involved in chromatin remodeling; C18E3.2 is probably required during mitosis of the T cells for asymmetric cell division.
KOG Annotation  SWI/SNF transcription activation complex subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:4211793..4212483)
Transcript overlap: 640 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 598
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.736
Wormbase (BLAST) RNAi primary
External "C18E3.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  K03B8.4
KOG Annotation  SWI/SNF transcription activation complex subunit
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 81
Relative score: 0.135 (Best raw score= for Gene )
Specificity index: 0.1
Wormbase (BLAST) RNAi primary
External "K03B8.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C40H5.8
Evidence for Inhibition 
Sliding Window Raw score: 134
Relative score: 0.224 (Best raw score= for Gene )
Specificity index: 0.165
Wormbase (BLAST) RNAi primary
External "C40H5.8" Links  Wormbase NCBI Phenobank 1
Cenix:12-f4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
(Please note that RNAiDB is not
hosting these data.)
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Cenix:12-f4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:12-f4 (PCR_reagent)
Remark  early embryonic: No significant defects seen in any of the recordings.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of K03B8.4 Browse using GBrowse
Gene Graph
Gene Plot of C40H5.8 Browse using GBrowse
Gene Graph
Gene Plot of C18E3.2 Browse using GBrowse
Gene Graph