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RNAi Experiment: Cenix:122-b2 Ace View of Cenix:122-b2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0250.1 (rpl-2)
Description of "B0250.1"  rpl-2 encodes a large ribosomal subunit L8 protein.
KOG Annotation  60s ribosomal protein L2/L8
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:20477404..20478439)
Transcript overlap: 421 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 343
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.761
External "B0250.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  B0250.3
Description of "B0250.3"  Associated GO Term : structural constituent of ribosome
Evidence for Inhibition 
Sliding Window Raw score: 106
Relative score: 0.314 (Best raw score= for Gene )
Specificity index: 0.239
Wormbase (BLAST) RNAi primary
External "B0250.3" Links  Wormbase NCBI Phenobank 1
Cenix:122-b2 Phenotypes Help with Phenotypes
Phenotype  Larval Arrest-Early (L1/L2)
External Movies 
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Cenix:122-b2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:122-b2 (PCR_reagent)
Remark  early embryonic: No significant defects seen in any of the recordings.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of B0250.1 Browse using GBrowse
Gene Graph
Gene Plot of B0250.3 Browse using GBrowse
Gene Graph