RNAi Experiment: Cenix:124-a6 |
Ace View of Cenix:124-a6
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Genes Inhibited |
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Gene Inhibited |
F42G8.5 |
Evidence for Inhibition |
ePCR |
Status: Best_ePCR (IV:8138424..8139692)
Transcript overlap: 589 nt |
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Sliding Window |
Raw score: 505
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.857 |
Wormbase (BLAST) |
RNAi primary |
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External "F42G8.5" Links |
1 |
Gene Inhibited |
F42G8.4 (pmk-3) |
Description of "F42G8.4" |
pmk-3 encodes a homolog of p38, a mitogen-activated protein kinase (MAPK), activated in vitro by MEK6, indicating that it does respond like p38 to physiological stress; PMK-3 is expressed in nuclei throughout the intestine; PMK-3 is activated by osmotic stresses when heterologously expressed in mammalian cells; null mutants do not exhibit observable growth defects or hypersensitivity to several tested known stresses. |
KOG Annotation  |
Mitogen-activated protein kinase
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Evidence for Inhibition |
ePCR |
Status: Bottom50_percentile_ePCR (IV:8138424..8139692)
Transcript overlap: 84 nt |
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Sliding Window |
Raw score: 84
Relative score: 0.166 (Best raw score= for Gene )
Specificity index: 0.143 |
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External "F42G8.4" Links |
1 |
Cenix:124-a6 Phenotypes |
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Phenotype |
WT
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Cenix:124-a6 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
Cenix:124-a6 (PCR_reagent) |
Remark |
3/3 tests are wildtype |
Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
Delivery Method |
Injection |
Date |
2005-3-24 |
Gene Plot of F42G8.5 |
Browse using GBrowse
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Gene Plot of F42G8.4 |
Browse using GBrowse
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