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RNAi Experiment: Cenix:129-g9 Ace View of Cenix:129-g9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F15H10.3 (apc-10)
Description of "F15H10.3"  apc-10 encodes a homolog of the fission yeast anaphase promoting complex subunit APC10; apc-10(RNAi) animals are generally unable to progress through meiotic divisions; initially they produce reduced numbers of viable embryos mixed with inviable embryos, but then show severe germline maintenance defects and become sterile.
KOG Annotation  Anaphase-promoting complex (APC), subunit 10
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:10428039..10428503)
Transcript overlap: 316 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 232
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.5
Wormbase (BLAST) RNAi primary
External "F15H10.3" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  F15H10.4 (tag-314)
KOG Annotation  Predicted E3 ubiquitin ligase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:10428039..10428503)
Transcript overlap: 316 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 232
Specificity index: 0.5
External "F15H10.4" Links  Wormbase NCBI Phenobank 1
Cenix:129-g9 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:129-g9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:129-g9 (PCR_reagent)
Remark  3/3 test are wt.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F15H10.4 Browse using GBrowse
Gene Graph
Gene Plot of F15H10.3 Browse using GBrowse
Gene Graph