Link to D2085.1Link to D2085.2RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:138-a5 Ace View of Cenix:138-a5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  D2085.1 (pyr-1)
Description of "D2085.1"  pyr-1 is orthologous to the human gene CARBAMYL PHOSPHATE SYNTHETASE I (CPS1, which when mutated leads to hyperammonemia (OMIM:237300); PYR-1 protein is predicted to be mitochondrial with 68% accuracy.
KOG Annotation  Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:8656984..8658180)
Transcript overlap: 1105 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1042
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "D2085.1" Links  Wormbase NCBI Phenobank 1
Cenix:138-a5 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:138-a5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:138-a5 (PCR_reagent)
Remark  3/3 tests are wt.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of D2085.1 Browse using GBrowse
Gene Graph