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RNAi Experiment: Cenix:142-c2 Ace View of Cenix:142-c2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y38H8A.4
Description of "Y38H8A.4"  Associated GO Term : protein kinase activity
KOG Annotation  Serine/threonine protein kinase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:13471098..13472295)
Transcript overlap: 553 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 448
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.742
Wormbase (BLAST) RNAi primary
External "Y38H8A.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  C27D6.11
Description of "C27D6.11"  Associated GO Term : protein kinase activity
Evidence for Inhibition 
Sliding Window Raw score: 156
Relative score: 0.348 (Best raw score= for Gene )
Specificity index: 0.258
Wormbase (BLAST) RNAi secondary
External "C27D6.11" Links  Wormbase NCBI Phenobank 1
Cenix:142-c2 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:142-c2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:142-c2 (PCR_reagent)
Remark  3/3 tests with wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C27D6.11 Browse using GBrowse
Gene Graph
Gene Plot of Y38H8A.4 Browse using GBrowse
Gene Graph