| RNAi Experiment: Cenix:144-d5 |
Ace View of Cenix:144-d5
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| Genes Inhibited |
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| Gene Inhibited |
Y48G8AL.8 (rpl-17) |
| Description of "Y48G8AL.8" |
rpl-17 encodes a large ribosomal subunit L17 protein; by homology, RPL-17 is predicted to function in protein biosynthesis; in C. elegans, RPL-17 activity is required for embryonic and germline development, as well as normal postembryonic growth rates. |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (I:1156628..1157677)
Transcript overlap: 573 nt |
|
| Sliding Window |
Raw score: 510
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.827 |
| Wormbase (BLAST) |
RNAi primary |
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| External "Y48G8AL.8" Links |
   1 2 |
| Gene Inhibited |
Y48G8AL.7 |
| Evidence for Inhibition |
| ePCR |
Status: Bottom50_percentile_ePCR (I:1156628..1157677)
Transcript overlap: 107 nt |
|
| Sliding Window |
Raw score: 107
Relative score: 0.21 (Best raw score= for Gene )
Specificity index: 0.173 |
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| External "Y48G8AL.7" Links |
1 2 |
| Cenix:144-d5 Phenotypes |
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| Embryonic |
Emb Penetrance None reported |
| Phenotype |
Severe Pleiotropic Defects
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External Movies
(Please note that RNAiDB is not
hosting these data.) |
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| Cenix:144-d5 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:144-d5 (PCR_reagent) |
| Remark |
early embryonic: Severe Pleiotropic Defects |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of Y48G8AL.7 |
Browse using GBrowse
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| Gene Plot of Y48G8AL.8 |
Browse using GBrowse
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