Link to Y45G5AM.1a.1Link to Y45G5AM.1bLink to Y45G5AM.1a.2Link to Y45G5AM.9bLink to Y45G5AM.9aRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:144-e3 Ace View of Cenix:144-e3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y45G5AM.1 (nhr-114)
Description of "Y45G5AM.1"  nhr-114 encodes, by alternative splicing, two isoforms of a nuclear hormone receptor that specifically binds GPA-13 in yeast two-hybrid assays; the interaction of NHR-114 with GPA-13 is independent of whether GPA-13 is constitutively activated or not; NHR-114 is expressed in intestine (and weakly in hypodermal cells), with mainly nuclear localization; NHR-114 has no obvious function or phenotype in RNAi assays.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:4187809..4188777)
Transcript overlap: 820 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 652
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y45G5AM.1" Links  Wormbase NCBI Phenobank 1
Cenix:144-e3 Phenotypes Help with Phenotypes
Adult  Sterile F1
Cenix:144-e3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:144-e3 (PCR_reagent)
Remark  post-embryonic: Sterile F1
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y45G5AM.1 Browse using GBrowse
Gene Graph