Link to Y65B4A.2Link to Y65B4A.1RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y65B4A.2Link to Y65B4A.7Link to Y65B4A.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:144-h9 Ace View of Cenix:144-h9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y65B4A.1
Description of "Y65B4A.1"  Associated GO Term : nucleotide binding
KOG Annotation  Transcription elongation factor TAT-SF1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:653814..654972)
Transcript overlap: 807 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 786
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.865
Wormbase (BLAST) RNAi primary
External "Y65B4A.1" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y65B4A.2
Description of "Y65B4A.2"  Associated GO Term : cysteine-type peptidase activity
KOG Annotation  Cysteine proteinase Cathepsin L
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:653814..654972)
Transcript overlap: 165 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 123
Relative score: 0.156 (Best raw score= for Gene )
Specificity index: 0.135
External "Y65B4A.2" Links  Wormbase NCBI Phenobank 1
Cenix:144-h9 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:144-h9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:144-h9 (PCR_reagent)
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y65B4A.1 Browse using GBrowse
Gene Graph
Gene Plot of Y65B4A.2 Browse using GBrowse
Gene Graph