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RNAi Experiment: Cenix:148-b4 Ace View of Cenix:148-b4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53H1.1
Description of "F53H1.1"  Associated GO Term : ATP binding
KOG Annotation  RNA helicase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:1307791..1308844)
Transcript overlap: 554 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.435
Wormbase (BLAST) RNAi primary
External "F53H1.1" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y73B3B.5
Evidence for Inhibition 
Sliding Window Raw score: 290
Relative score: 0.565 (Best raw score= for Gene )
Specificity index: 0.246
Wormbase (BLAST) RNAi primary
External "Y73B3B.5" Links  Wormbase NCBI Phenobank 1 2
Gene Inhibited  Y73B3B.4
Description of "Y73B3B.4"  Associated GO Term : ATP binding
Evidence for Inhibition 
Sliding Window Raw score: 376
Relative score: 0.733 (Best raw score= for Gene )
Specificity index: 0.319
Wormbase (BLAST) RNAi primary
External "Y73B3B.4" Links  Wormbase NCBI Phenobank 1 2
Cenix:148-b4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:148-b4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:148-b4 (PCR_reagent)
Remark  early embryonic: Except for enlarged yolk granules, which are likely a product of the experimental conditions, no defects detected.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y73B3B.5 Browse using GBrowse
Gene Graph
Gene Plot of F53H1.1 Browse using GBrowse
Gene Graph
Gene Plot of Y73B3B.4 Browse using GBrowse
Gene Graph