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RNAi Experiment: Cenix:149-b6 Ace View of Cenix:149-b6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T01C3.6 (rps-16)
Description of "T01C3.6"  rps-16 encodes a small ribosomal subunit S16 protein.
KOG Annotation  40S ribosomal protein S16
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:15002143..15003208)
Transcript overlap: 532 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 511
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.643
Wormbase (BLAST) RNAi primary
External "T01C3.6" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  T01C3.11
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (V:15002143..15003208)
Transcript overlap: 347 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 284
Relative score: 0.556 (Best raw score= for Gene )
Specificity index: 0.357
Wormbase (BLAST) RNAi primary
External "T01C3.11" Links  Wormbase NCBI Phenobank 1
Cenix:149-b6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Osmotic Integrity defective
External Movies 
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Cenix:149-b6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:149-b6 (PCR_reagent)
Remark  early embryonic: Osmotic Integrity
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T01C3.6 Browse using GBrowse
Gene Graph
Gene Plot of T01C3.11 Browse using GBrowse
Gene Graph