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RNAi Experiment: Cenix:15-g2 Ace View of Cenix:15-g2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46B6.3 (smg-4)
Description of "F46B6.3"  Associated GO Term : mRNA catabolism, nonsense-mediated
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:9777694..9779371)
Transcript overlap: 448 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 406
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.561
Wormbase (BLAST) RNAi primary
External "F46B6.3" Links  Wormbase NCBI Phenobank 1 2 3
Gene Inhibited  F46B6.12
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (V:9777694..9779371)
Transcript overlap: 423 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 318
Relative score: 0.783 (Best raw score= for Gene )
Specificity index: 0.439
Wormbase (BLAST) RNAi primary
External "F46B6.12" Links  Wormbase NCBI Phenobank 1 2 3
Cenix:15-g2 Phenotypes Help with Phenotypes
Phenotype  WT
External Movies 
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hosting these data.)
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Cenix:15-g2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:15-g2 (PCR_reagent)
Remark  early embryonic: Clear cut
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F46B6.3 Browse using GBrowse
Gene Graph
Gene Plot of F46B6.12 Browse using GBrowse
Gene Graph