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RNAi Experiment: Cenix:157-c6 Ace View of Cenix:157-c6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C06A8.4 (skr-17)
Description of "C06A8.4"  skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs.
KOG Annotation  SCF ubiquitin ligase, Skp1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:7783623..7784554)
Transcript overlap: 730 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 688
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C06A8.4" Links  Wormbase NCBI Phenobank 1
Cenix:157-c6 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:157-c6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:157-c6 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of C06A8.4 Browse using GBrowse
Gene Graph