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RNAi Experiment: Cenix:16-h1 Ace View of Cenix:16-h1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46A9.4 (skr-2)
Description of "F46A9.4"  skr-2 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-2 is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis; SKR-2::GFP is detected exclusively in the intestine.
KOG Annotation  SCF ubiquitin ligase, Skp1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9469589..9470759)
Transcript overlap: 718 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 592
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F46A9.4" Links  Wormbase NCBI Phenobank 1
Cenix:16-h1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:16-h1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:16-h1 (PCR_reagent)
Remark  early embryonic: Overall wildtype. No reproducible defects found.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F46A9.4 Browse using GBrowse
Gene Graph