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RNAi Experiment: Cenix:162-d10 Ace View of Cenix:162-d10
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54A3.4
Description of "F54A3.4"  The F54A3.4 gene encodes a homolog of the human gene CBS, which when mutated leads to homocystinuria (OMIM:236200).
KOG Annotation  Cystathionine beta-synthase and related enzymes
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2219870..2221376)
Transcript overlap: 981 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 918
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F54A3.4" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y59C2A.3
Evidence for Inhibition 
ePCR Transcript overlap: 53 nt Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "Y59C2A.3" Links  Wormbase NCBI Phenobank 1
Cenix:162-d10 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:162-d10 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:162-d10 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F54A3.4 Browse using GBrowse
Gene Graph
Gene Plot of Y59C2A.3 Browse using GBrowse
Gene Graph