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RNAi Experiment: Cenix:162-h9 Ace View of Cenix:162-h9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53G2.6 (tsr-1)
Description of "F53G2.6"  tsr-1 encodes a homolog of human transportin-SR, a nuclear transport receptor, and affects embryonic viability.
KOG Annotation  Nuclear transport regulator
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2465108..2465823)
Transcript overlap: 389 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 347
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F53G2.6" Links  Wormbase NCBI Phenobank 1
Cenix:162-h9 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  WT_postembryonic_morphology
External Movies 
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Cenix:162-h9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:162-h9 (PCR_reagent)
Remark  early embryonic: Overall wildtype with minor defects in the range of normal variability.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F53G2.6 Browse using GBrowse
Gene Graph