| RNAi Experiment: Cenix:163-c1 |
Ace View of Cenix:163-c1
|
| Genes Inhibited |
 |
| Gene Inhibited |
F56A4.9 |
| Description of "F56A4.9" |
Associated GO Term : transmembrane receptor protein tyrosine kinase activity |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (V:2455845..2456705)
Transcript overlap: 597 nt |
|
| Sliding Window |
Raw score: 534
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.441 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F56A4.9" Links |
   1 2 3 4 |
| Gene Inhibited |
Y19D10A.7 |
| Description of "Y19D10A.7" |
Associated GO Term : transmembrane receptor protein tyrosine kinase activity |
| Evidence for Inhibition |
| ePCR |
Status: Top85_percentile_ePCR (V:2347884..2348744)
Transcript overlap: 549 nt |
|
| Sliding Window |
Raw score: 465
Relative score: 0.871 (Best raw score= for Gene )
Specificity index: 0.384 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "Y19D10A.7" Links |
1 2 3 4 |
| Gene Inhibited |
F15E11.10 (srbc-15) |
| Evidence for Inhibition |
| ePCR |
Status: Bottom50_percentile_ePCR (V:2347884..2348744)
Transcript overlap: 123 nt |
|
| Sliding Window |
Raw score: 102
Relative score: 0.191 (Best raw score= for Gene )
Specificity index: 0.084 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F15E11.10" Links |
1 2 3 4 |
| Gene Inhibited |
F56A4.3 |
| Evidence for Inhibition |
| ePCR |
Status: Bottom50_percentile_ePCR (V:2455845..2456705)
Transcript overlap: 131 nt |
|
| Sliding Window |
Raw score: 110
Relative score: 0.206 (Best raw score= for Gene )
Specificity index: 0.091 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "F56A4.3" Links |
1 2 3 4 |
| Cenix:163-c1 Phenotypes |
|
|
| Phenotype |
WT
|
| Cenix:163-c1 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:163-c1 (PCR_reagent) |
| Remark |
Wildtype results in all three tests. |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of F56A4.9 |
Browse using GBrowse
|
 |
| Gene Plot of Y19D10A.7 |
Browse using GBrowse
|
 |
| Gene Plot of F56A4.3 |
Browse using GBrowse
|
 |
| Gene Plot of F15E11.10 |
Browse using GBrowse
|
 |
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