Link to F56A4.3Link to F56A4.9RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F15E11.10Link to Y19D10A.7geneMap Link to F15E11.10Link to Y19D10A.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F56A4.9geneMap Link to F15E11.10Link to Y19D10A.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F56A4.9geneMap Link to F56A4.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y45G12C.2Link to F56A4.4Link to Y45G12C.3Link to F15E11.10geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: Cenix:166-e6 Ace View of Cenix:166-e6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56A4.9
Description of "F56A4.9"  Associated GO Term : transmembrane receptor protein tyrosine kinase activity
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:2455845..2456705)
Transcript overlap: 597 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 534
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.441
Wormbase (BLAST) RNAi primary
External "F56A4.9" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  Y19D10A.7
Description of "Y19D10A.7"  Associated GO Term : transmembrane receptor protein tyrosine kinase activity
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (V:2347884..2348744)
Transcript overlap: 549 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 465
Relative score: 0.871 (Best raw score= for Gene )
Specificity index: 0.384
Wormbase (BLAST) RNAi primary
External "Y19D10A.7" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  F15E11.10 (srbc-15)
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:2347884..2348744)
Transcript overlap: 123 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 102
Relative score: 0.191 (Best raw score= for Gene )
Specificity index: 0.084
Wormbase (BLAST) RNAi primary
External "F15E11.10" Links  Wormbase NCBI Phenobank 1 2 3 4
Gene Inhibited  F56A4.3
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:2455845..2456705)
Transcript overlap: 131 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 110
Relative score: 0.206 (Best raw score= for Gene )
Specificity index: 0.091
Wormbase (BLAST) RNAi primary
External "F56A4.3" Links  Wormbase NCBI Phenobank 1 2 3 4
Cenix:166-e6 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:166-e6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:166-e6 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of F56A4.9 Browse using GBrowse
Gene Graph
Gene Plot of Y19D10A.7 Browse using GBrowse
Gene Graph
Gene Plot of F56A4.3 Browse using GBrowse
Gene Graph
Gene Plot of F15E11.10 Browse using GBrowse
Gene Graph