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RNAi Experiment: Cenix:168-g11 Ace View of Cenix:168-g11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y40B10A.2
Description of "Y40B10A.2"  Associated GO Term : O-methyltransferase activity
KOG Annotation  O-methyltransferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:2060267..2060999)
Transcript overlap: 290 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 248
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y40B10A.2" Links  Wormbase NCBI Phenobank 1
Gene Inhibited  Y40B10A.8 (nhr-86)
Description of "Y40B10A.8"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 64 nt Explain types of evidence for RNAi inhibition
External "Y40B10A.8" Links  Wormbase NCBI Phenobank 1
Cenix:168-g11 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:168-g11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:168-g11 (PCR_reagent)
Remark  Wildtype results in all three tests.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y40B10A.8 Browse using GBrowse
Gene Graph
Gene Plot of Y40B10A.2 Browse using GBrowse
Gene Graph