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RNAi Experiment: Cenix:170-c9 Ace View of Cenix:170-c9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57G11C.11 (coq-3)
Description of "Y57G11C.11"  coq-3 encodes a putative 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase, orthologous to S. cerevisiae COQ3; COQ-3 is required for ubiquinone biosynthesis and for normally short lifespan; coq-3(RNAi) animals have reduced levels of coenzyme Q8, coenzyme Q9, and superoxide, and have abnormally long lifespans.
KOG Annotation  Methyltransferases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:14792856..14793590)
Transcript overlap: 450 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 388
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y57G11C.11" Links  Wormbase NCBI Phenobank 1
Cenix:170-c9 Phenotypes Help with Phenotypes
Phenotype  WT
Cenix:170-c9 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:170-c9 (PCR_reagent)
Remark  3/3 tests give wildtype results.
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of Y57G11C.11 Browse using GBrowse
Gene Graph