| RNAi Experiment: Cenix:171-a7 |
Ace View of Cenix:171-a7
|
| Genes Inhibited |
 |
| Gene Inhibited |
Y73B3A.5 |
| Evidence for Inhibition |
| ePCR |
Status: Unique_ePCR (X:107857..108164)
Transcript overlap: 308 nt |
|
| Sliding Window |
Raw score: 287
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.546 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "Y73B3A.5" Links |
   1 |
| Gene Inhibited |
C37F5.1 (lin-1) |
| Description of "C37F5.1" |
lin-1 encodes an Ets-domain-containing transcription factor that is a member of the ETS gene family that includes human ELK1, 3, and 4 (OMIM:600247); LIN-1 functions as a general effector of MAP kinase-mediated signaling; when MAP kinase is inactive, LIN-1 forms a complex with LIN-31/WH that inhibits vulval cell fate specification; upon MAP kinase activation (vulval induction), LIN-1 is phosphorylated, dissociates from LIN-31, and becomes inactive, thus allowing for vulval development. |
| KOG Annotation |
Predicted transcription factor
|
|
| Evidence for Inhibition |
| Sliding Window |
Raw score: 239
Relative score: 0.833 (Best raw score= for Gene )
Specificity index: 0.454 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "C37F5.1" Links |
1 |
| Cenix:171-a7 Phenotypes |
|
|
| Phenotype |
WT
|
| Cenix:171-a7 Experiment Details |
Ace View |
| Laboratory |
TH |
| RNAi Reagent & Type |
Cenix:171-a7 (PCR_reagent) |
| Remark |
Wildtype results in all three tests. |
| Reference |
Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...." |
| Delivery Method |
Injection |
| Date |
2005-3-24 |
| Gene Plot of Y73B3A.5 |
Browse using GBrowse
|
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| Gene Plot of C37F5.1 |
Browse using GBrowse
|
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